Genetic Observation Secondary Findings Code System

{
  "description" : "Codes to denote a guideline or policy statement when a genetic test result is being shared as a secondary finding.",
  "date" : "2024-03-12T13:30:10+11:00",
  "meta" : {
    "lastUpdated" : "2023-01-31T07:07:38.434+11:00",
    "profile" : [ "http://hl7.org/fhir/StructureDefinition/shareablecodesystem" ]
  },
  "publisher" : "HL7 International / Orders and Observations",
  "jurisdiction" : [ {
    "coding" : [ {
      "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
      "code" : "001"
    } ]
  } ],
  "content" : "complete",
  "property" : null,
  "name" : "GeneticObservationSecondaryFindings",
  "experimental" : false,
  "resourceType" : "CodeSystem",
  "title" : "Genetic Observation Secondary Findings Code System",
  "extension" : [ {
    "valueCode" : "oo",
    "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg"
  }, {
    "valueCode" : "trial-use",
    "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status"
  }, {
    "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
    "valueInteger" : 3
  }, {
    "extension" : [ {
      "valueString" : "concept",
      "url" : "path"
    }, {
      "url" : "count",
      "valueInteger" : 2
    } ],
    "url" : "http://health-samurai.io/extensions/excised-data"
  }, {
    "url" : "http://health-samurai.io/extensions/source",
    "valueCode" : "db"
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  "status" : "active",
  "id" : "f5d63b11-14a1-4629-87d7-b576ae2101e9",
  "valueSet" : "http://hl7.org/fhir/ValueSet/secondary-finding",
  "url" : "http://hl7.org/fhir/secondary-finding",
  "identifier" : [ {
    "system" : "urn:ietf:rfc:3986",
    "value" : "urn:oid:2.16.840.1.113883.4.642.4.1286"
  } ],
  "caseSensitive" : true,
  "version" : "5.1.0-snapshot1",
  "contact" : [ {
    "telecom" : [ {
      "system" : "url",
      "value" : "http://www.hl7.org/Special/committees/orders"
    } ]
  } ],
  "text" : {
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This case-sensitive code system <code>http://hl7.org/fhir/secondary-finding</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">acmg-version1<a name=\"secondary-finding-acmg-version1\"> </a></td><td>ACMG Version 1</td><td>First release (2013): ACMG Recommendations for Reporting of Incidental Findings in Clinical Exome and Genome Sequencing.  https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3727274/</td></tr><tr><td style=\"white-space:nowrap\">acmg-version2<a name=\"secondary-finding-acmg-version2\"> </a></td><td>ACMG Version 2</td><td>Second release (2016): Recommendations for reporting of secondary findings in clinical exome and genome sequencing, 2016 update (ACMG SF v2.0): a policy statement of the American College of Medical Genetics and Genomics. https://www.ncbi.nlm.nih.gov/pubmed/27854360</td></tr></table></div>",
    "status" : "generated"
  }
}